Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 RNF216P1-203ENST00000404404 2427 ntBASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 AC011676.5-201ENST00000624864 2660 ntBASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 GGT3P-204ENST00000453783 1664 ntBASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 SPDYE17-201ENST00000412399 783 ntBASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 GNAQP1-201ENST00000444815 1067 ntBASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 CR383656.12-201ENST00000549567 513 ntBASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
LRIT1Q9P2V4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRIT1Q9P2V4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
LRIT1Q9P2V4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRIT1Q9P2V4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
LRIT1Q9P2V4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRIT1Q9P2V4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
LRIT1Q9P2V4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.71■□□□□ 0.1
LRIT1Q9P2V4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
LRIT1Q9P2V4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRIT1Q9P2V4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 NME2P1-201ENST00000426182 414 ntBASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 AC104794.3-201ENST00000566840 1248 ntBASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 TP53TG3HP-202ENST00000569755 579 ntBASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 AL365330.1-201ENST00000607459 531 ntBASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 MIR6069-201ENST00000620069 79 ntBASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT1Q9P2V4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT1Q9P2V4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms