Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 CRYGEP-201ENST00000412192 528 ntBASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 Z83851.2-201ENST00000609564 659 ntBASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 AC104109.2-201ENST00000602919 1418 ntBASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTPS2Q9NRF8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 AL590627.1-203ENST00000421194 1026 ntBASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 VN2R19P-201ENST00000442399 1052 ntBASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 AC005412.3-201ENST00000580309 715 ntBASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTPS2Q9NRF8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 AC067930.6-201ENST00000623257 4947 ntBASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 RPL13AP23-201ENST00000480739 586 ntBASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 CXCL1P1-201ENST00000502804 216 ntBASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.24■□□□□ 0.03
CTPS2Q9NRF8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms