Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 AC104596.2-201ENST00000512793 793 ntBASIC17.21■□□□□ 0.35
TLR9Q9NR96 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 AC015936.2-201ENST00000593177 259 ntBASIC17.21■□□□□ 0.35
TLR9Q9NR96 AC008735.3-201ENST00000596646 500 ntBASIC17.21■□□□□ 0.35
TLR9Q9NR96 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 MIR8072-201ENST00000614241 80 ntBASIC17.21■□□□□ 0.35
TLR9Q9NR96 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.21■□□□□ 0.35
TLR9Q9NR96 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TLR9Q9NR96 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TLR9Q9NR96 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
TLR9Q9NR96 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.34
TLR9Q9NR96 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 AL645728.1-201ENST00000366221 2101 ntBASIC17.2■□□□□ 0.34
TLR9Q9NR96 CLK3P2-201ENST00000427566 1453 ntBASIC17.2■□□□□ 0.34
TLR9Q9NR96 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 AC025048.3-201ENST00000590609 569 ntBASIC17.2■□□□□ 0.34
TLR9Q9NR96 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 AC005702.4-201ENST00000618393 416 ntBASIC17.2■□□□□ 0.34
TLR9Q9NR96 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
TLR9Q9NR96 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 OR6D1P-202ENST00000641007 5290 ntBASIC17.2■□□□□ 0.34
TLR9Q9NR96 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TLR9Q9NR96 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 BOLA2P3-201ENST00000404566 256 ntBASIC17.19■□□□□ 0.34
TLR9Q9NR96 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 RARRES2P5-201ENST00000564013 466 ntBASIC17.19■□□□□ 0.34
TLR9Q9NR96 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 MIR4525-201ENST00000580000 75 ntBASIC17.19■□□□□ 0.34
TLR9Q9NR96 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 MIR6775-201ENST00000617557 69 ntBASIC17.19■□□□□ 0.34
TLR9Q9NR96 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.19■□□□□ 0.34
TLR9Q9NR96 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TLR9Q9NR96 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms