Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 FAM220BP-201ENST00000377689 816 ntBASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 AC005034.1-201ENST00000426657 489 ntBASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 MEIS3P1-201ENST00000495167 958 ntBASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 AC098859.1-201ENST00000502915 1238 ntBASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 MAX-210ENST00000555419 765 ntTSL 5 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 AL079307.3-201ENST00000556114 283 ntBASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 AC104794.3-201ENST00000566840 1248 ntBASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 AC061975.2-201ENST00000581722 295 ntBASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 CHCHD2P3-201ENST00000603038 451 ntBASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 AC018892.3-201ENST00000623986 2499 ntBASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 IMPDH1P4-201ENST00000445028 1534 ntBASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRTAP4-3Q9BYR4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP4-3Q9BYR4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms