Protein–RNA interactions for Protein: Q9BUF7

CRB3, Protein crumbs homolog 3, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3Q9BUF7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 AC092580.3-201ENST00000430932 139 ntBASIC15.33■□□□□ 0.04
CRB3Q9BUF7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 SPDYE12P-201ENST00000618416 771 ntBASIC15.33■□□□□ 0.04
CRB3Q9BUF7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CRB3Q9BUF7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 GGT3P-204ENST00000453783 1664 ntBASIC15.32■□□□□ 0.04
CRB3Q9BUF7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 LINC01144-201ENST00000626198 1710 ntBASIC15.32■□□□□ 0.04
CRB3Q9BUF7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 AC241585.1-201ENST00000433527 519 ntBASIC15.32■□□□□ 0.04
CRB3Q9BUF7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 UBALD1-205ENST00000590891 2641 ntBASIC15.32■□□□□ 0.04
CRB3Q9BUF7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CRB3Q9BUF7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CRB3Q9BUF7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CRB3Q9BUF7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CRB3Q9BUF7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.31■□□□□ 0.04
CRB3Q9BUF7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CRB3Q9BUF7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CRB3Q9BUF7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CRB3Q9BUF7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.31■□□□□ 0.04
CRB3Q9BUF7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CRB3Q9BUF7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms