Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 PCDHA12-202ENST00000613593 2588 ntBASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 AC100757.3-201ENST00000622361 1406 ntBASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 FAM8A3P-201ENST00000427218 844 ntBASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CDK5RAP1Q96SZ6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 SPDYE17-201ENST00000412399 783 ntBASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 TEX28P1-201ENST00000613479 1221 ntBASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 TEX28P2-201ENST00000617764 1221 ntBASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 AL590560.3-201ENST00000623350 461 ntBASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP1Q96SZ6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDK5RAP1Q96SZ6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms