Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GRAMD1AQ96CP6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GRAMD1AQ96CP6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.83■□□□□ 0.28
GRAMD1AQ96CP6 AL136379.1-201ENST00000623471 2642 ntBASIC16.83■□□□□ 0.28
GRAMD1AQ96CP6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GRAMD1AQ96CP6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 MIR4469-201ENST00000583919 79 ntBASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 LINC02084-201ENST00000606069 1096 ntBASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.82■□□□□ 0.28
GRAMD1AQ96CP6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 ACTG1P14-201ENST00000446382 1122 ntBASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 HCG4B-203ENST00000450128 991 ntBASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 MIR4751-201ENST00000578027 74 ntBASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 GGTLC5P-201ENST00000617623 998 ntBASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 LINC00895-201ENST00000629028 1637 ntBASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GRAMD1AQ96CP6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms