Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 AC036164.1-201ENST00000570544 333 ntBASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 LETM1P2-201ENST00000597330 2178 ntBASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF4Q8WZA2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 BOLA2P3-201ENST00000404566 256 ntBASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 CROCCP4-201ENST00000457096 498 ntBASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 AL391069.4-201ENST00000609583 481 ntBASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RAPGEF4Q8WZA2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 AZGP1P1-201ENST00000411909 902 ntBASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 POU5F1P6-201ENST00000466990 990 ntBASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 BTNL10-201ENST00000595971 695 ntBASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 AL158212.4-201ENST00000624062 1286 ntBASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
RAPGEF4Q8WZA2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 HLA-A-202ENST00000376806 1854 ntBASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF4Q8WZA2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms