Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 AL512356.2-201ENST00000546955 174 ntBASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 SPCS2P1-201ENST00000561636 679 ntBASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 AC005498.2-205ENST00000593218 784 ntBASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 LINC02012-201ENST00000608206 1725 ntBASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDND2Q8NHS1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 AC023824.1-201ENST00000562945 2975 ntBASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 AC069262.1-201ENST00000539058 672 ntBASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 DUX4L27-201ENST00000554796 1261 ntBASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 MIR4492-201ENST00000581627 80 ntBASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 AC027307.2-201ENST00000591252 911 ntBASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 AC008267.7-201ENST00000624570 1194 ntBASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 AC092171.3-201ENST00000610122 2651 ntBASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 AC079328.2-201ENST00000561241 3354 ntBASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLDND2Q8NHS1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDND2Q8NHS1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms