Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 PPP1R26-AS1-202ENST00000603624 2919 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 TUBB8-204ENST00000564130 2438 ntTSL 5 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 JMJD7-PLA2G4B-202ENST00000382448 3331 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SVIPQ8NHG7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 SLC5A11-210ENST00000568579 2139 ntTSL 5 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 AL049796.1-201ENST00000565336 1766 ntBASIC10.01□□□□□ -0.81
SVIPQ8NHG7 MPP2-203ENST00000461854 3462 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 AC012676.5-201ENST00000624337 1955 ntBASIC10.01□□□□□ -0.81
SVIPQ8NHG7 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 LINC01561-201ENST00000369071 2176 ntBASIC10.01□□□□□ -0.81
SVIPQ8NHG7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 AL022069.1-201ENST00000568025 1636 ntBASIC10.01□□□□□ -0.81
SVIPQ8NHG7 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 NT5DC2-201ENST00000307076 2047 ntAPPRIS P3 TSL 2 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 RPL6P21-201ENST00000418672 846 ntBASIC10.01□□□□□ -0.81
SVIPQ8NHG7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 AC137932.3-201ENST00000602042 3660 ntTSL 2 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 FP325330.2-201ENST00000624219 5630 ntBASIC10.01□□□□□ -0.81
SVIPQ8NHG7 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 NOBOX-202ENST00000483238 1980 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 ARMC1-202ENST00000458464 2849 ntTSL 2 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 CSPG4P11-201ENST00000560634 4910 ntBASIC10.01□□□□□ -0.81
SVIPQ8NHG7 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 TCP11L1-202ENST00000432887 2633 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SVIPQ8NHG7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
SVIPQ8NHG7 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
SVIPQ8NHG7 EPSTI1-201ENST00000313624 3114 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
SVIPQ8NHG7 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
SVIPQ8NHG7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC10□□□□□ -0.81
SVIPQ8NHG7 Z95114.4-201ENST00000623420 3578 ntBASIC10□□□□□ -0.81
SVIPQ8NHG7 CMIP-211ENST00000621537 4000 ntTSL 5 BASIC10□□□□□ -0.81
SVIPQ8NHG7 AC127024.8-201ENST00000623719 2094 ntBASIC10□□□□□ -0.81
SVIPQ8NHG7 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SVIPQ8NHG7 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
SVIPQ8NHG7 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC10□□□□□ -0.81
SVIPQ8NHG7 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC10□□□□□ -0.81
SVIPQ8NHG7 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SVIPQ8NHG7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
SVIPQ8NHG7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10□□□□□ -0.81
SVIPQ8NHG7 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC10□□□□□ -0.81
SVIPQ8NHG7 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC10□□□□□ -0.81
SVIPQ8NHG7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SVIPQ8NHG7 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
SVIPQ8NHG7 ST3GAL5-254ENST00000640322 2368 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
SVIPQ8NHG7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
SVIPQ8NHG7 UXS1-202ENST00000409032 1935 ntTSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms