Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 RNU6-775P-201ENST00000459318 96 ntBASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 RNA5SP416-201ENST00000516838 111 ntBASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 OR7E14P-202ENST00000530490 1290 ntBASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 Z83851.2-201ENST00000609564 659 ntBASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 AC005785.2-201ENST00000624655 631 ntBASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 EGFEM1P-202ENST00000431685 1563 ntBASIC16.43■□□□□ 0.22
EFCAB3Q8N7B9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 NFIC-211ENST00000641145 8399 ntBASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 RPS2P1-201ENST00000434010 821 ntBASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 IGHV3-22-201ENST00000520721 359 ntBASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 AC106795.5-201ENST00000623288 454 ntBASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 SIGLEC16-201ENST00000599858 1437 ntBASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 AC092384.3-202ENST00000564646 2873 ntBASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 AC004817.3-201ENST00000602957 2129 ntBASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
EFCAB3Q8N7B9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 AL356309.3-201ENST00000624132 1934 ntBASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 FRMD8P1-201ENST00000440433 1524 ntBASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 YBX2P1-201ENST00000394192 760 ntBASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 MTND2P3-201ENST00000452458 470 ntBASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC16.41■□□□□ 0.22
EFCAB3Q8N7B9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms