Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
OTOP1Q7RTM1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 KLF2P4-201ENST00000451959 1225 ntBASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
OTOP1Q7RTM1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 AD000864.1-201ENST00000624076 2295 ntBASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 RNA5SP412-201ENST00000516234 123 ntBASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 AC233724.13-201ENST00000598383 410 ntBASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 RPSAP52-203ENST00000622976 1023 ntBASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 AC006538.1-201ENST00000567905 1585 ntBASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
OTOP1Q7RTM1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
OTOP1Q7RTM1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
OTOP1Q7RTM1 CDC14C-201ENST00000428251 1719 ntBASIC18.74■□□□□ 0.59
OTOP1Q7RTM1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.74■□□□□ 0.59
OTOP1Q7RTM1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.74■□□□□ 0.59
OTOP1Q7RTM1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
OTOP1Q7RTM1 HCG11-201ENST00000411553 5696 ntBASIC18.74■□□□□ 0.59
OTOP1Q7RTM1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.74■□□□□ 0.59
OTOP1Q7RTM1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
OTOP1Q7RTM1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.74■□□□□ 0.59
OTOP1Q7RTM1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
OTOP1Q7RTM1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.74■□□□□ 0.59
OTOP1Q7RTM1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms