Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 TPRX2P-201ENST00000535362 881 ntBASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 AC005622.1-201ENST00000636801 1703 ntBASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC149Q6ZUS6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 PKD1P5-201ENST00000532415 10291 ntBASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 SRD5A3P1-201ENST00000603021 949 ntBASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC149Q6ZUS6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 RN7SL837P-201ENST00000463010 287 ntBASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 MIR4321-201ENST00000592276 80 ntBASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC149Q6ZUS6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms