Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
GABPB1Q06547 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC16.68■□□□□ 0.26
GABPB1Q06547 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABPB1Q06547 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
GABPB1Q06547 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC16.68■□□□□ 0.26
GABPB1Q06547 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
GABPB1Q06547 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.67■□□□□ 0.26
GABPB1Q06547 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.67■□□□□ 0.26
GABPB1Q06547 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GABPB1Q06547 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.67■□□□□ 0.26
GABPB1Q06547 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.67■□□□□ 0.26
GABPB1Q06547 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.67■□□□□ 0.26
GABPB1Q06547 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GABPB1Q06547 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
GABPB1Q06547 WWOX-216ENST00000569818 525 ntBASIC16.67■□□□□ 0.26
GABPB1Q06547 AC092666.2-201ENST00000613287 246 ntBASIC16.67■□□□□ 0.26
GABPB1Q06547 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.67■□□□□ 0.26
GABPB1Q06547 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.67■□□□□ 0.26
GABPB1Q06547 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.67■□□□□ 0.26
GABPB1Q06547 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
GABPB1Q06547 AC015909.5-201ENST00000624336 2266 ntBASIC16.67■□□□□ 0.26
GABPB1Q06547 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 PCGF3-213ENST00000620529 1899 ntBASIC16.67■□□□□ 0.26
GABPB1Q06547 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GABPB1Q06547 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GABPB1Q06547 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
GABPB1Q06547 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.66■□□□□ 0.26
GABPB1Q06547 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.66■□□□□ 0.26
GABPB1Q06547 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.66■□□□□ 0.26
GABPB1Q06547 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
GABPB1Q06547 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.66■□□□□ 0.26
GABPB1Q06547 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GABPB1Q06547 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.66■□□□□ 0.26
GABPB1Q06547 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.66■□□□□ 0.26
GABPB1Q06547 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GABPB1Q06547 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GABPB1Q06547 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GABPB1Q06547 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.66■□□□□ 0.26
GABPB1Q06547 PID1-202ENST00000392054 2745 ntTSL 2 BASIC16.66■□□□□ 0.26
GABPB1Q06547 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
GABPB1Q06547 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC16.66■□□□□ 0.26
GABPB1Q06547 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GABPB1Q06547 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPB1Q06547 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPB1Q06547 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPB1Q06547 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABPB1Q06547 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.65■□□□□ 0.26
GABPB1Q06547 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GABPB1Q06547 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPB1Q06547 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.65■□□□□ 0.26
GABPB1Q06547 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPB1Q06547 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPB1Q06547 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
GABPB1Q06547 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GABPB1Q06547 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPB1Q06547 SNX33P1-201ENST00000592116 1762 ntBASIC16.65■□□□□ 0.26
GABPB1Q06547 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPB1Q06547 INVS-201ENST00000262456 2968 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPB1Q06547 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPB1Q06547 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPB1Q06547 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.65■□□□□ 0.26
GABPB1Q06547 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.65■□□□□ 0.26
GABPB1Q06547 AC026271.3-201ENST00000571884 352 ntBASIC16.65■□□□□ 0.26
GABPB1Q06547 AC133552.2-202ENST00000575694 574 ntBASIC16.65■□□□□ 0.26
GABPB1Q06547 AC024563.2-201ENST00000603282 481 ntBASIC16.65■□□□□ 0.26
GABPB1Q06547 AC009154.2-201ENST00000621177 724 ntBASIC16.65■□□□□ 0.26
GABPB1Q06547 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABPB1Q06547 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABPB1Q06547 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GABPB1Q06547 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPB1Q06547 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms