Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC026748.1-201ENST00000624349 3251 ntBASIC14.08□□□□□ -0.16
AP3S2P59780 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
AP3S2P59780 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.08□□□□□ -0.16
AP3S2P59780 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
AP3S2P59780 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.08□□□□□ -0.16
AP3S2P59780 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
AP3S2P59780 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
AP3S2P59780 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
AP3S2P59780 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S2P59780 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
AP3S2P59780 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.07□□□□□ -0.16
AP3S2P59780 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.07□□□□□ -0.16
AP3S2P59780 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.07□□□□□ -0.16
AP3S2P59780 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S2P59780 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S2P59780 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.07□□□□□ -0.16
AP3S2P59780 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.07□□□□□ -0.16
AP3S2P59780 AC010654.1-201ENST00000615722 808 ntBASIC14.07□□□□□ -0.16
AP3S2P59780 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.07□□□□□ -0.16
AP3S2P59780 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
AP3S2P59780 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
AP3S2P59780 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S2P59780 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S2P59780 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S2P59780 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S2P59780 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.07□□□□□ -0.16
AP3S2P59780 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.07□□□□□ -0.16
AP3S2P59780 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
AP3S2P59780 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
AP3S2P59780 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AP3S2P59780 CICP24-201ENST00000605464 2705 ntBASIC14.06□□□□□ -0.16
AP3S2P59780 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.06□□□□□ -0.16
AP3S2P59780 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
AP3S2P59780 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.06□□□□□ -0.16
AP3S2P59780 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S2P59780 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S2P59780 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S2P59780 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
AP3S2P59780 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.06□□□□□ -0.16
AP3S2P59780 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
AP3S2P59780 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
AP3S2P59780 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 STARP1-201ENST00000397973 869 ntBASIC14.06□□□□□ -0.16
AP3S2P59780 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.06□□□□□ -0.16
AP3S2P59780 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
AP3S2P59780 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S2P59780 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.06□□□□□ -0.16
AP3S2P59780 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.06□□□□□ -0.16
AP3S2P59780 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S2P59780 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AP3S2P59780 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AP3S2P59780 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.06□□□□□ -0.16
AP3S2P59780 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AP3S2P59780 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms