Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.8□□□□□ -0.36
FAM3BP58499 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
FAM3BP58499 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM3BP58499 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.8□□□□□ -0.36
FAM3BP58499 MIR3917-201ENST00000580971 93 ntBASIC12.8□□□□□ -0.36
FAM3BP58499 AC024243.1-201ENST00000609234 778 ntBASIC12.8□□□□□ -0.36
FAM3BP58499 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.8□□□□□ -0.36
FAM3BP58499 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
FAM3BP58499 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
FAM3BP58499 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM3BP58499 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM3BP58499 AL109954.1-202ENST00000564051 2148 ntBASIC12.8□□□□□ -0.36
FAM3BP58499 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM3BP58499 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM3BP58499 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
FAM3BP58499 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.8□□□□□ -0.36
FAM3BP58499 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FAM3BP58499 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
FAM3BP58499 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 SSR4P1-203ENST00000599569 2260 ntBASIC12.79□□□□□ -0.36
FAM3BP58499 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM3BP58499 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.79□□□□□ -0.36
FAM3BP58499 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM3BP58499 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
FAM3BP58499 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 ATP5G2P1-201ENST00000433580 426 ntBASIC12.79□□□□□ -0.36
FAM3BP58499 KRT18P48-201ENST00000434763 852 ntBASIC12.79□□□□□ -0.36
FAM3BP58499 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 SEC1P-202ENST00000473944 940 ntBASIC12.79□□□□□ -0.36
FAM3BP58499 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.79□□□□□ -0.36
FAM3BP58499 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM3BP58499 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM3BP58499 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.79□□□□□ -0.36
FAM3BP58499 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM3BP58499 AL121672.3-201ENST00000608644 468 ntBASIC12.79□□□□□ -0.36
FAM3BP58499 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM3BP58499 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM3BP58499 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 TUBB8P12-201ENST00000308911 1335 ntBASIC12.79□□□□□ -0.36
FAM3BP58499 TUBB7P-202ENST00000428444 1305 ntBASIC12.79□□□□□ -0.36
FAM3BP58499 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.79□□□□□ -0.36
FAM3BP58499 TUBB8P7-204ENST00000567960 1332 ntBASIC12.79□□□□□ -0.36
FAM3BP58499 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM3BP58499 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.79□□□□□ -0.36
FAM3BP58499 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.79□□□□□ -0.36
FAM3BP58499 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM3BP58499 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM3BP58499 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.79□□□□□ -0.36
FAM3BP58499 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FAM3BP58499 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
FAM3BP58499 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms