Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDH4P55283 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.63■□□□□ 0.25
CDH4P55283 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDH4P55283 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDH4P55283 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDH4P55283 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDH4P55283 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.62■□□□□ 0.25
CDH4P55283 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH4P55283 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.62■□□□□ 0.25
CDH4P55283 AC055876.3-201ENST00000431496 288 ntBASIC16.62■□□□□ 0.25
CDH4P55283 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH4P55283 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.62■□□□□ 0.25
CDH4P55283 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CDH4P55283 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.62■□□□□ 0.25
CDH4P55283 AC097493.3-201ENST00000509725 367 ntBASIC16.62■□□□□ 0.25
CDH4P55283 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDH4P55283 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH4P55283 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.62■□□□□ 0.25
CDH4P55283 AL133215.2-201ENST00000609242 977 ntBASIC16.62■□□□□ 0.25
CDH4P55283 AC138649.4-201ENST00000612222 287 ntBASIC16.62■□□□□ 0.25
CDH4P55283 AC073592.8-201ENST00000624126 511 ntBASIC16.62■□□□□ 0.25
CDH4P55283 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH4P55283 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDH4P55283 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CDH4P55283 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 FO538757.1-201ENST00000623083 1397 ntBASIC16.62■□□□□ 0.25
CDH4P55283 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH4P55283 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDH4P55283 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH4P55283 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CDH4P55283 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDH4P55283 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH4P55283 CETN4P-206ENST00000642099 2168 ntBASIC16.61■□□□□ 0.25
CDH4P55283 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH4P55283 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH4P55283 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH4P55283 AC084018.2-201ENST00000613093 2607 ntBASIC16.61■□□□□ 0.25
CDH4P55283 MTHFR-217ENST00000641820 1569 ntBASIC16.61■□□□□ 0.25
CDH4P55283 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CDH4P55283 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 MIR770-201ENST00000390219 98 ntBASIC16.61■□□□□ 0.25
CDH4P55283 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 HLA-V-204ENST00000476601 1289 ntBASIC16.61■□□□□ 0.25
CDH4P55283 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH4P55283 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH4P55283 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH4P55283 AL589739.1-201ENST00000607720 493 ntBASIC16.61■□□□□ 0.25
CDH4P55283 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH4P55283 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH4P55283 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms