Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.26■□□□□ 0.35
PCK1P35558 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.26■□□□□ 0.35
PCK1P35558 AC079328.2-201ENST00000561241 3354 ntBASIC17.26■□□□□ 0.35
PCK1P35558 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PCK1P35558 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.26■□□□□ 0.35
PCK1P35558 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.26■□□□□ 0.35
PCK1P35558 AL590627.1-203ENST00000421194 1026 ntBASIC17.26■□□□□ 0.35
PCK1P35558 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.26■□□□□ 0.35
PCK1P35558 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.26■□□□□ 0.35
PCK1P35558 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.26■□□□□ 0.35
PCK1P35558 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.26■□□□□ 0.35
PCK1P35558 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.26■□□□□ 0.35
PCK1P35558 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.26■□□□□ 0.35
PCK1P35558 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.26■□□□□ 0.35
PCK1P35558 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
PCK1P35558 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.25■□□□□ 0.35
PCK1P35558 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.25■□□□□ 0.35
PCK1P35558 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.25■□□□□ 0.35
PCK1P35558 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.25■□□□□ 0.35
PCK1P35558 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PCK1P35558 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCK1P35558 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.25■□□□□ 0.35
PCK1P35558 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.25■□□□□ 0.35
PCK1P35558 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.25■□□□□ 0.35
PCK1P35558 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCK1P35558 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCK1P35558 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
PCK1P35558 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PCK1P35558 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.25■□□□□ 0.35
PCK1P35558 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.25■□□□□ 0.35
PCK1P35558 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.25■□□□□ 0.35
PCK1P35558 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.25■□□□□ 0.35
PCK1P35558 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.25■□□□□ 0.35
PCK1P35558 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.25■□□□□ 0.35
PCK1P35558 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCK1P35558 AL009183.1-201ENST00000603760 355 ntBASIC17.25■□□□□ 0.35
PCK1P35558 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.25■□□□□ 0.35
PCK1P35558 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.25■□□□□ 0.35
PCK1P35558 AC004877.2-201ENST00000623941 599 ntBASIC17.25■□□□□ 0.35
PCK1P35558 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.25■□□□□ 0.35
PCK1P35558 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.25■□□□□ 0.35
PCK1P35558 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCK1P35558 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCK1P35558 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.25■□□□□ 0.35
PCK1P35558 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCK1P35558 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 AC006449.6-201ENST00000612330 2296 ntBASIC17.24■□□□□ 0.35
PCK1P35558 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.24■□□□□ 0.35
PCK1P35558 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.24■□□□□ 0.35
PCK1P35558 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCK1P35558 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCK1P35558 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.24■□□□□ 0.35
PCK1P35558 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 AC025580.3-201ENST00000617932 1424 ntBASIC17.24■□□□□ 0.35
PCK1P35558 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
PCK1P35558 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCK1P35558 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCK1P35558 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.24■□□□□ 0.35
PCK1P35558 AC092474.2-201ENST00000424288 719 ntBASIC17.24■□□□□ 0.35
PCK1P35558 AC140658.5-201ENST00000438532 169 ntBASIC17.24■□□□□ 0.35
PCK1P35558 KRT18P2-201ENST00000447938 1258 ntBASIC17.24■□□□□ 0.35
PCK1P35558 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.24■□□□□ 0.35
PCK1P35558 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.24■□□□□ 0.35
PCK1P35558 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.24■□□□□ 0.35
PCK1P35558 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms