Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
VARSP26640 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.13■□□□□ 0.17
VARSP26640 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VARSP26640 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.13■□□□□ 0.17
VARSP26640 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
VARSP26640 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
VARSP26640 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.12■□□□□ 0.17
VARSP26640 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
VARSP26640 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.12■□□□□ 0.17
VARSP26640 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.12■□□□□ 0.17
VARSP26640 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.12■□□□□ 0.17
VARSP26640 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
VARSP26640 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
VARSP26640 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.12■□□□□ 0.17
VARSP26640 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
VARSP26640 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 HCG4-201ENST00000418983 998 ntBASIC16.12■□□□□ 0.17
VARSP26640 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.12■□□□□ 0.17
VARSP26640 AC007967.2-201ENST00000432613 625 ntBASIC16.12■□□□□ 0.17
VARSP26640 AL513480.1-201ENST00000451731 511 ntBASIC16.12■□□□□ 0.17
VARSP26640 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.12■□□□□ 0.17
VARSP26640 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.12■□□□□ 0.17
VARSP26640 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.12■□□□□ 0.17
VARSP26640 MIR3197-201ENST00000582241 73 ntBASIC16.12■□□□□ 0.17
VARSP26640 AP001350.2-201ENST00000625104 1094 ntBASIC16.12■□□□□ 0.17
VARSP26640 AC010507.1-201ENST00000633895 436 ntBASIC16.12■□□□□ 0.17
VARSP26640 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.12■□□□□ 0.17
VARSP26640 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.12■□□□□ 0.17
VARSP26640 AC012569.1-201ENST00000591191 1524 ntBASIC16.12■□□□□ 0.17
VARSP26640 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.12■□□□□ 0.17
VARSP26640 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.12■□□□□ 0.17
VARSP26640 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.12■□□□□ 0.17
VARSP26640 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARSP26640 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.11■□□□□ 0.17
VARSP26640 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
VARSP26640 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.11■□□□□ 0.17
VARSP26640 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.11■□□□□ 0.17
VARSP26640 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.11■□□□□ 0.17
VARSP26640 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.11■□□□□ 0.17
VARSP26640 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VARSP26640 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
VARSP26640 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.11■□□□□ 0.17
VARSP26640 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.11■□□□□ 0.17
VARSP26640 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.11■□□□□ 0.17
VARSP26640 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.11■□□□□ 0.17
VARSP26640 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
VARSP26640 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARSP26640 AL031731.1-201ENST00000642131 2094 ntBASIC16.1■□□□□ 0.17
VARSP26640 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARSP26640 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARSP26640 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms