Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TNFSF4P23510 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFSF4P23510 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFSF4P23510 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFSF4P23510 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TNFSF4P23510 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFSF4P23510 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TNFSF4P23510 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TNFSF4P23510 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
TNFSF4P23510 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TNFSF4P23510 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TNFSF4P23510 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 STOM-202ENST00000347359 870 ntTSL 2 BASIC14□□□□□ -0.17
TNFSF4P23510 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14□□□□□ -0.17
TNFSF4P23510 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14□□□□□ -0.17
TNFSF4P23510 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14□□□□□ -0.17
TNFSF4P23510 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TNFSF4P23510 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14□□□□□ -0.17
TNFSF4P23510 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14□□□□□ -0.17
TNFSF4P23510 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14□□□□□ -0.17
TNFSF4P23510 AC243562.1-201ENST00000560672 389 ntBASIC14□□□□□ -0.17
TNFSF4P23510 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
TNFSF4P23510 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14□□□□□ -0.17
TNFSF4P23510 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14□□□□□ -0.17
TNFSF4P23510 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14□□□□□ -0.17
TNFSF4P23510 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TNFSF4P23510 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TNFSF4P23510 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14□□□□□ -0.17
TNFSF4P23510 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TNFSF4P23510 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TNFSF4P23510 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFSF4P23510 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TNFSF4P23510 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TNFSF4P23510 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TNFSF4P23510 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 CICP6-201ENST00000457191 2729 ntBASIC13.99□□□□□ -0.17
TNFSF4P23510 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TNFSF4P23510 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.99□□□□□ -0.17
TNFSF4P23510 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TNFSF4P23510 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TNFSF4P23510 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.99□□□□□ -0.17
TNFSF4P23510 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.99□□□□□ -0.17
TNFSF4P23510 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.99□□□□□ -0.17
TNFSF4P23510 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.99□□□□□ -0.17
TNFSF4P23510 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
TNFSF4P23510 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.99□□□□□ -0.17
TNFSF4P23510 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
TNFSF4P23510 AC004461.1-201ENST00000412461 403 ntBASIC13.99□□□□□ -0.17
TNFSF4P23510 SPCS2P4-201ENST00000436160 681 ntBASIC13.99□□□□□ -0.17
TNFSF4P23510 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.99□□□□□ -0.17
TNFSF4P23510 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.99□□□□□ -0.17
TNFSF4P23510 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.99□□□□□ -0.17
TNFSF4P23510 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.99□□□□□ -0.17
TNFSF4P23510 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.99□□□□□ -0.17
TNFSF4P23510 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.99□□□□□ -0.17
TNFSF4P23510 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.99□□□□□ -0.17
TNFSF4P23510 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
TNFSF4P23510 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFSF4P23510 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms