Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 AC092902.6-201ENST00000641783 218 ntBASIC14.65□□□□□ -0.06
HLA-DOBP13765 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 PAUPAR-201ENST00000630360 2965 ntBASIC14.65□□□□□ -0.06
HLA-DOBP13765 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 U82695.1-201ENST00000635752 1889 ntBASIC14.65□□□□□ -0.06
HLA-DOBP13765 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 PMS2P7-201ENST00000506558 1336 ntBASIC14.65□□□□□ -0.06
HLA-DOBP13765 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
HLA-DOBP13765 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 MCCD1P2-201ENST00000423228 335 ntBASIC14.64□□□□□ -0.07
HLA-DOBP13765 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 AL603832.2-201ENST00000566195 2125 ntBASIC14.64□□□□□ -0.07
HLA-DOBP13765 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 AL138918.1-201ENST00000568306 659 ntBASIC14.64□□□□□ -0.07
HLA-DOBP13765 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 FLJ16779-201ENST00000612722 7638 ntBASIC14.64□□□□□ -0.07
HLA-DOBP13765 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.64□□□□□ -0.07
HLA-DOBP13765 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DOBP13765 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DOBP13765 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DOBP13765 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DOBP13765 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DOBP13765 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DOBP13765 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DOBP13765 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DOBP13765 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DOBP13765 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DOBP13765 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.63□□□□□ -0.07
HLA-DOBP13765 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DOBP13765 AL355306.1-201ENST00000415580 579 ntBASIC14.63□□□□□ -0.07
HLA-DOBP13765 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DOBP13765 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DOBP13765 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms