Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 OR2I1P-209ENST00000641730 5365 ntBASIC15.49■□□□□ 0.07
CLPTM1O96005 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPTM1O96005 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.49■□□□□ 0.07
CLPTM1O96005 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CLPTM1O96005 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLPTM1O96005 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 GPR89P-201ENST00000407924 1495 ntBASIC15.49■□□□□ 0.07
CLPTM1O96005 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CLPTM1O96005 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLPTM1O96005 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLPTM1O96005 HCG4P8-203ENST00000443049 980 ntBASIC15.49■□□□□ 0.07
CLPTM1O96005 GUSBP12-201ENST00000513727 720 ntBASIC15.49■□□□□ 0.07
CLPTM1O96005 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.49■□□□□ 0.07
CLPTM1O96005 MIR3180-1-201ENST00000580374 94 ntBASIC15.49■□□□□ 0.07
CLPTM1O96005 AC090616.6-201ENST00000582640 721 ntBASIC15.49■□□□□ 0.07
CLPTM1O96005 MIR3180-3-201ENST00000584616 94 ntBASIC15.49■□□□□ 0.07
CLPTM1O96005 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.49■□□□□ 0.07
CLPTM1O96005 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.49■□□□□ 0.07
CLPTM1O96005 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPTM1O96005 AL592071.1-201ENST00000611956 408 ntBASIC15.49■□□□□ 0.07
CLPTM1O96005 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.49■□□□□ 0.07
CLPTM1O96005 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.49■□□□□ 0.07
CLPTM1O96005 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPTM1O96005 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CLPTM1O96005 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPTM1O96005 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPTM1O96005 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLPTM1O96005 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPTM1O96005 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.48■□□□□ 0.07
CLPTM1O96005 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLPTM1O96005 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 LINC01101-201ENST00000622953 1884 ntBASIC15.48■□□□□ 0.07
CLPTM1O96005 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.48■□□□□ 0.07
CLPTM1O96005 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.48■□□□□ 0.07
CLPTM1O96005 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
CLPTM1O96005 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.48■□□□□ 0.07
CLPTM1O96005 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLPTM1O96005 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.48■□□□□ 0.07
CLPTM1O96005 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.48■□□□□ 0.07
CLPTM1O96005 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.48■□□□□ 0.07
CLPTM1O96005 AC092329.2-201ENST00000598402 547 ntBASIC15.48■□□□□ 0.07
CLPTM1O96005 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.48■□□□□ 0.07
CLPTM1O96005 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.48■□□□□ 0.07
CLPTM1O96005 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
CLPTM1O96005 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLPTM1O96005 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CLPTM1O96005 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.48■□□□□ 0.07
CLPTM1O96005 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLPTM1O96005 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLPTM1O96005 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.48■□□□□ 0.07
CLPTM1O96005 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLPTM1O96005 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLPTM1O96005 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLPTM1O96005 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CLPTM1O96005 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CLPTM1O96005 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms