Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNCGO76070 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNCGO76070 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SNCGO76070 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.02□□□□□ -0.64
SNCGO76070 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SNCGO76070 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
SNCGO76070 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNCGO76070 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNCGO76070 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNCGO76070 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SNCGO76070 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.02□□□□□ -0.64
SNCGO76070 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
SNCGO76070 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
SNCGO76070 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
SNCGO76070 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC11.02□□□□□ -0.64
SNCGO76070 AC132938.6-201ENST00000623828 1655 ntBASIC11.02□□□□□ -0.64
SNCGO76070 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SNCGO76070 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
SNCGO76070 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.02□□□□□ -0.65
SNCGO76070 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SNCGO76070 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
SNCGO76070 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SNCGO76070 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 MYCLP1-201ENST00000372451 1075 ntBASIC11.02□□□□□ -0.65
SNCGO76070 NIFKP9-201ENST00000419265 221 ntBASIC11.02□□□□□ -0.65
SNCGO76070 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.02□□□□□ -0.65
SNCGO76070 GRAMD4P1-201ENST00000435181 1110 ntBASIC11.02□□□□□ -0.65
SNCGO76070 PPP1R14BP5-201ENST00000440334 435 ntBASIC11.02□□□□□ -0.65
SNCGO76070 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC11.02□□□□□ -0.65
SNCGO76070 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC11.02□□□□□ -0.65
SNCGO76070 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC11.02□□□□□ -0.65
SNCGO76070 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC11.02□□□□□ -0.65
SNCGO76070 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC11.02□□□□□ -0.65
SNCGO76070 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SNCGO76070 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC11.02□□□□□ -0.65
SNCGO76070 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC11.02□□□□□ -0.65
SNCGO76070 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC11.02□□□□□ -0.65
SNCGO76070 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SNCGO76070 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 DUSP16-202ENST00000298573 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.02□□□□□ -0.65
SNCGO76070 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC11.02□□□□□ -0.65
SNCGO76070 CICP24-201ENST00000605464 2705 ntBASIC11.02□□□□□ -0.65
SNCGO76070 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.02□□□□□ -0.65
SNCGO76070 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SNCGO76070 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SNCGO76070 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SNCGO76070 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.02□□□□□ -0.65
SNCGO76070 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.02□□□□□ -0.65
SNCGO76070 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNCGO76070 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
SNCGO76070 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.02□□□□□ -0.65
SNCGO76070 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.01□□□□□ -0.65
SNCGO76070 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SNCGO76070 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.01□□□□□ -0.65
SNCGO76070 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
SNCGO76070 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.01□□□□□ -0.65
SNCGO76070 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.01□□□□□ -0.65
SNCGO76070 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.01□□□□□ -0.65
SNCGO76070 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SNCGO76070 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC11.01□□□□□ -0.65
SNCGO76070 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SNCGO76070 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.01□□□□□ -0.65
SNCGO76070 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SNCGO76070 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms