Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 PCED1CP-201ENST00000419887 785 ntBASIC13.43□□□□□ -0.26
CLN5O75503 KRT17P6-201ENST00000453795 1220 ntBASIC13.43□□□□□ -0.26
CLN5O75503 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.43□□□□□ -0.26
CLN5O75503 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLN5O75503 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.43□□□□□ -0.26
CLN5O75503 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLN5O75503 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.43□□□□□ -0.26
CLN5O75503 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.43□□□□□ -0.26
CLN5O75503 TPSP2-201ENST00000561760 610 ntBASIC13.43□□□□□ -0.26
CLN5O75503 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.43□□□□□ -0.26
CLN5O75503 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.43□□□□□ -0.26
CLN5O75503 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.43□□□□□ -0.26
CLN5O75503 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CLN5O75503 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLN5O75503 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLN5O75503 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CLN5O75503 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CLN5O75503 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.43□□□□□ -0.26
CLN5O75503 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLN5O75503 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.43□□□□□ -0.26
CLN5O75503 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.43□□□□□ -0.26
CLN5O75503 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLN5O75503 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLN5O75503 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.43□□□□□ -0.26
CLN5O75503 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLN5O75503 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CLN5O75503 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CLN5O75503 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CLN5O75503 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.42□□□□□ -0.26
CLN5O75503 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.42□□□□□ -0.26
CLN5O75503 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.42□□□□□ -0.26
CLN5O75503 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.42□□□□□ -0.26
CLN5O75503 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CLN5O75503 TOB2P1-201ENST00000469761 992 ntBASIC13.42□□□□□ -0.26
CLN5O75503 AC096582.2-201ENST00000510860 516 ntBASIC13.42□□□□□ -0.26
CLN5O75503 AP002490.2-201ENST00000524791 560 ntBASIC13.42□□□□□ -0.26
CLN5O75503 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.42□□□□□ -0.26
CLN5O75503 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.42□□□□□ -0.26
CLN5O75503 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CLN5O75503 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
CLN5O75503 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.42□□□□□ -0.26
CLN5O75503 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.42□□□□□ -0.26
CLN5O75503 AP002414.4-201ENST00000589764 1148 ntBASIC13.42□□□□□ -0.26
CLN5O75503 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.42□□□□□ -0.26
CLN5O75503 AL590326.2-201ENST00000625139 305 ntBASIC13.42□□□□□ -0.26
CLN5O75503 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
CLN5O75503 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.42□□□□□ -0.26
CLN5O75503 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.42□□□□□ -0.26
CLN5O75503 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CLN5O75503 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CLN5O75503 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 IER3-202ENST00000376377 1350 ntBASIC13.42□□□□□ -0.26
CLN5O75503 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.42□□□□□ -0.26
CLN5O75503 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLN5O75503 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.41□□□□□ -0.26
CLN5O75503 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.41□□□□□ -0.26
CLN5O75503 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CLN5O75503 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.41□□□□□ -0.26
CLN5O75503 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
CLN5O75503 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLN5O75503 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.41□□□□□ -0.26
CLN5O75503 NSUN5P1-202ENST00000421140 1535 ntBASIC13.41□□□□□ -0.26
CLN5O75503 FRMD8P1-201ENST00000440433 1524 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms