Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE3O75131 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 BASP1P1-201ENST00000430708 665 ntBASIC15.74■□□□□ 0.11
CPNE3O75131 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.74■□□□□ 0.11
CPNE3O75131 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.74■□□□□ 0.11
CPNE3O75131 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.74■□□□□ 0.11
CPNE3O75131 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.74■□□□□ 0.11
CPNE3O75131 AC140878.1-201ENST00000565277 250 ntBASIC15.74■□□□□ 0.11
CPNE3O75131 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.74■□□□□ 0.11
CPNE3O75131 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE3O75131 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CPNE3O75131 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 AC006277.1-201ENST00000624348 1610 ntBASIC15.74■□□□□ 0.11
CPNE3O75131 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE3O75131 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 AC008677.1-201ENST00000519230 1561 ntBASIC15.74■□□□□ 0.11
CPNE3O75131 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CPNE3O75131 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CPNE3O75131 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE3O75131 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE3O75131 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE3O75131 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CPNE3O75131 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CPNE3O75131 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.73■□□□□ 0.11
CPNE3O75131 AC055876.3-201ENST00000431496 288 ntBASIC15.73■□□□□ 0.11
CPNE3O75131 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE3O75131 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.73■□□□□ 0.11
CPNE3O75131 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.73■□□□□ 0.11
CPNE3O75131 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.73■□□□□ 0.11
CPNE3O75131 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.73■□□□□ 0.11
CPNE3O75131 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.73■□□□□ 0.11
CPNE3O75131 AL390955.2-201ENST00000603032 514 ntBASIC15.73■□□□□ 0.11
CPNE3O75131 AC138649.4-201ENST00000612222 287 ntBASIC15.73■□□□□ 0.11
CPNE3O75131 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.73■□□□□ 0.11
CPNE3O75131 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
CPNE3O75131 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CPNE3O75131 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CPNE3O75131 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CPNE3O75131 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.72■□□□□ 0.11
CPNE3O75131 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CPNE3O75131 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.72■□□□□ 0.11
CPNE3O75131 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CPNE3O75131 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CPNE3O75131 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms