Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GMDSO60547 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GMDSO60547 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.53□□□□□ -0.08
GMDSO60547 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GMDSO60547 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.53□□□□□ -0.08
GMDSO60547 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.53□□□□□ -0.08
GMDSO60547 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.53□□□□□ -0.08
GMDSO60547 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.53□□□□□ -0.08
GMDSO60547 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.53□□□□□ -0.08
GMDSO60547 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.53□□□□□ -0.08
GMDSO60547 ELK2BP-201ENST00000415014 1224 ntBASIC14.53□□□□□ -0.08
GMDSO60547 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.53□□□□□ -0.08
GMDSO60547 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.53□□□□□ -0.08
GMDSO60547 RPS15P9-201ENST00000494093 319 ntBASIC14.53□□□□□ -0.08
GMDSO60547 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.53□□□□□ -0.08
GMDSO60547 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.53□□□□□ -0.08
GMDSO60547 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
GMDSO60547 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.53□□□□□ -0.08
GMDSO60547 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.53□□□□□ -0.08
GMDSO60547 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.53□□□□□ -0.08
GMDSO60547 AL356488.2-201ENST00000602755 427 ntBASIC14.53□□□□□ -0.08
GMDSO60547 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.53□□□□□ -0.08
GMDSO60547 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.53□□□□□ -0.08
GMDSO60547 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.53□□□□□ -0.08
GMDSO60547 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.53□□□□□ -0.08
GMDSO60547 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.53□□□□□ -0.08
GMDSO60547 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
GMDSO60547 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GMDSO60547 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.53□□□□□ -0.08
GMDSO60547 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.53□□□□□ -0.08
GMDSO60547 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
GMDSO60547 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.52□□□□□ -0.08
GMDSO60547 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.52□□□□□ -0.08
GMDSO60547 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
GMDSO60547 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
GMDSO60547 AC006277.1-201ENST00000624348 1610 ntBASIC14.52□□□□□ -0.08
GMDSO60547 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.52□□□□□ -0.08
GMDSO60547 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.52□□□□□ -0.08
GMDSO60547 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
GMDSO60547 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
GMDSO60547 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GMDSO60547 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.52□□□□□ -0.08
GMDSO60547 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.52□□□□□ -0.09
GMDSO60547 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.52□□□□□ -0.09
GMDSO60547 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.52□□□□□ -0.09
GMDSO60547 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.52□□□□□ -0.09
GMDSO60547 AL031284.1-201ENST00000419297 478 ntBASIC14.52□□□□□ -0.09
GMDSO60547 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
GMDSO60547 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.52□□□□□ -0.09
GMDSO60547 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GMDSO60547 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.52□□□□□ -0.09
GMDSO60547 AL603832.2-201ENST00000566195 2125 ntBASIC14.52□□□□□ -0.09
GMDSO60547 AP001005.1-201ENST00000571755 1248 ntBASIC14.52□□□□□ -0.09
GMDSO60547 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GMDSO60547 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.52□□□□□ -0.09
GMDSO60547 AC148477.8-201ENST00000624298 468 ntBASIC14.52□□□□□ -0.09
GMDSO60547 FAM215A-202ENST00000632077 792 ntBASIC14.52□□□□□ -0.09
GMDSO60547 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
GMDSO60547 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
GMDSO60547 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
GMDSO60547 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMDSO60547 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms