Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RPL13AP25-201ENST00000484130 612 ntBASIC17.13■□□□□ 0.33
SOX1O00570 AC022137.2-201ENST00000503482 481 ntBASIC17.13■□□□□ 0.33
SOX1O00570 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.13■□□□□ 0.33
SOX1O00570 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SOX1O00570 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.13■□□□□ 0.33
SOX1O00570 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.13■□□□□ 0.33
SOX1O00570 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX1O00570 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.13■□□□□ 0.33
SOX1O00570 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.13■□□□□ 0.33
SOX1O00570 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SOX1O00570 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX1O00570 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.13■□□□□ 0.33
SOX1O00570 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.13■□□□□ 0.33
SOX1O00570 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SOX1O00570 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX1O00570 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
SOX1O00570 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SOX1O00570 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX1O00570 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SOX1O00570 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX1O00570 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX1O00570 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX1O00570 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SOX1O00570 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SOX1O00570 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.12■□□□□ 0.33
SOX1O00570 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SOX1O00570 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 CYP4F24P-201ENST00000586049 1580 ntBASIC17.12■□□□□ 0.33
SOX1O00570 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
SOX1O00570 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.12■□□□□ 0.33
SOX1O00570 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.12■□□□□ 0.33
SOX1O00570 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SOX1O00570 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.12■□□□□ 0.33
SOX1O00570 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.12■□□□□ 0.33
SOX1O00570 Z97180.1-201ENST00000445173 988 ntBASIC17.12■□□□□ 0.33
SOX1O00570 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 NUP210P1-202ENST00000504322 710 ntBASIC17.12■□□□□ 0.33
SOX1O00570 NPM1P43-201ENST00000558669 786 ntBASIC17.12■□□□□ 0.33
SOX1O00570 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.12■□□□□ 0.33
SOX1O00570 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.12■□□□□ 0.33
SOX1O00570 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.12■□□□□ 0.33
SOX1O00570 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.12■□□□□ 0.33
SOX1O00570 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.12■□□□□ 0.33
SOX1O00570 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
SOX1O00570 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.12■□□□□ 0.33
SOX1O00570 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SOX1O00570 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.12■□□□□ 0.33
SOX1O00570 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.12■□□□□ 0.33
SOX1O00570 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.12■□□□□ 0.33
SOX1O00570 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SOX1O00570 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.12■□□□□ 0.33
SOX1O00570 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.12■□□□□ 0.33
SOX1O00570 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.11■□□□□ 0.33
SOX1O00570 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SOX1O00570 SLC25A1P3-201ENST00000395415 828 ntBASIC17.11■□□□□ 0.33
SOX1O00570 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SOX1O00570 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.11■□□□□ 0.33
SOX1O00570 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.11■□□□□ 0.33
SOX1O00570 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.11■□□□□ 0.33
SOX1O00570 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.11■□□□□ 0.33
SOX1O00570 RN7SL774P-201ENST00000577467 290 ntBASIC17.11■□□□□ 0.33
SOX1O00570 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.11■□□□□ 0.33
SOX1O00570 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SOX1O00570 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.11■□□□□ 0.33
SOX1O00570 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SOX1O00570 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SOX1O00570 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.11■□□□□ 0.33
SOX1O00570 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.11■□□□□ 0.33
SOX1O00570 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.11■□□□□ 0.33
SOX1O00570 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SOX1O00570 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms