Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC006449.6-201ENST00000612330 2296 ntBASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 AC108751.1-201ENST00000490852 363 ntBASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 AC093909.1-201ENST00000504731 1122 ntBASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 RNA5SP419-201ENST00000515908 135 ntBASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 AC087641.1-201ENST00000557561 1021 ntBASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 AP001005.1-201ENST00000571755 1248 ntBASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 AP001350.2-201ENST00000625104 1094 ntBASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RHBDD3Q9Y3P4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 AC104640.1-201ENST00000562617 2109 ntBASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 AC009078.2-202ENST00000463353 338 ntBASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 MIR4751-201ENST00000578027 74 ntBASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 SLC25A6P4-201ENST00000586535 553 ntBASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RHBDD3Q9Y3P4 AC010654.1-201ENST00000615722 808 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms