Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.05■□□□□ 0
RPH3AQ9Y2J0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.05■□□□□ 0
RPH3AQ9Y2J0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.05■□□□□ 0
RPH3AQ9Y2J0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 CNN2P11-201ENST00000429351 262 ntBASIC15.05■□□□□ -0
RPH3AQ9Y2J0 ADH5P3-201ENST00000433842 1137 ntBASIC15.05■□□□□ -0
RPH3AQ9Y2J0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 AC105339.1-204ENST00000636249 355 ntBASIC15.05■□□□□ -0
RPH3AQ9Y2J0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 AC103702.1-201ENST00000548801 2630 ntBASIC15.05■□□□□ -0
RPH3AQ9Y2J0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
RPH3AQ9Y2J0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 RN7SL589P-201ENST00000481268 310 ntBASIC15.04■□□□□ -0
RPH3AQ9Y2J0 AC079140.1-201ENST00000508039 487 ntBASIC15.04■□□□□ -0
RPH3AQ9Y2J0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 AC022145.2-201ENST00000598203 171 ntBASIC15.04■□□□□ -0
RPH3AQ9Y2J0 AC106028.4-201ENST00000614509 607 ntBASIC15.04■□□□□ -0
RPH3AQ9Y2J0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
RPH3AQ9Y2J0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RPH3AQ9Y2J0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms