Protein–RNA interactions for Protein: Q9UHD1

CHORDC1, Cysteine and histidine-rich domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1Q9UHD1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHORDC1Q9UHD1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHORDC1Q9UHD1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
CHORDC1Q9UHD1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHORDC1Q9UHD1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHORDC1Q9UHD1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.57■□□□□ 0.4
CHORDC1Q9UHD1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHORDC1Q9UHD1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.57■□□□□ 0.4
CHORDC1Q9UHD1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHORDC1Q9UHD1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CHORDC1Q9UHD1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 PCGF3-213ENST00000620529 1899 ntBASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 RNU1-129P-201ENST00000384064 167 ntBASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 TFAMP1-201ENST00000412727 736 ntBASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 AL355306.1-201ENST00000415580 579 ntBASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 KRT8P48-201ENST00000515599 1220 ntBASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 U1.21-201ENST00000580816 167 ntBASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 AC022145.2-201ENST00000598203 171 ntBASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHORDC1Q9UHD1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 ADH5P3-201ENST00000433842 1137 ntBASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 SPDYE11-202ENST00000450699 704 ntBASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 AP000344.2-201ENST00000512987 629 ntBASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 FAM86C2P-203ENST00000528684 1004 ntBASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 SPDYE9P-201ENST00000570642 692 ntBASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 AL031055.1-201ENST00000606362 631 ntBASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 SPDYE10P-202ENST00000612005 668 ntBASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 SPDYE8P-202ENST00000612377 668 ntBASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 AL161645.1-201ENST00000622716 1255 ntBASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHORDC1Q9UHD1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHORDC1Q9UHD1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHORDC1Q9UHD1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.54■□□□□ 0.4
CHORDC1Q9UHD1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHORDC1Q9UHD1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.54■□□□□ 0.4
CHORDC1Q9UHD1 AC024909.3-201ENST00000611513 2257 ntBASIC17.54■□□□□ 0.4
CHORDC1Q9UHD1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CHORDC1Q9UHD1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.54■□□□□ 0.4
CHORDC1Q9UHD1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms