Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 AL365203.3-201ENST00000609742 2057 ntBASIC17.2■□□□□ 0.34
LHX5Q9H2C1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 HAUS4P1-201ENST00000406739 1145 ntBASIC17.2■□□□□ 0.34
LHX5Q9H2C1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 CDC14C-201ENST00000428251 1719 ntBASIC17.2■□□□□ 0.34
LHX5Q9H2C1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 AC022188.1-201ENST00000620960 1664 ntBASIC17.2■□□□□ 0.34
LHX5Q9H2C1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.2■□□□□ 0.34
LHX5Q9H2C1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 HLA-H-201ENST00000383620 1096 ntBASIC17.19■□□□□ 0.34
LHX5Q9H2C1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 SLC25A39P2-201ENST00000537614 270 ntBASIC17.19■□□□□ 0.34
LHX5Q9H2C1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 UXT-AS1-201ENST00000590504 1525 ntBASIC17.19■□□□□ 0.34
LHX5Q9H2C1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 AC112504.1-201ENST00000623415 1841 ntBASIC17.19■□□□□ 0.34
LHX5Q9H2C1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LHX5Q9H2C1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 LINC02447-202ENST00000501888 2146 ntBASIC17.18■□□□□ 0.34
LHX5Q9H2C1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 RFPL4AP1-201ENST00000530883 850 ntBASIC17.18■□□□□ 0.34
LHX5Q9H2C1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 AC027612.4-201ENST00000605371 583 ntBASIC17.18■□□□□ 0.34
LHX5Q9H2C1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.18■□□□□ 0.34
LHX5Q9H2C1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms