Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VPS11Q9H270 UPK3BP1-201ENST00000428678 509 ntBASIC16.5■□□□□ 0.23
VPS11Q9H270 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS11Q9H270 HCG4P8-203ENST00000443049 980 ntBASIC16.5■□□□□ 0.23
VPS11Q9H270 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.5■□□□□ 0.23
VPS11Q9H270 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
VPS11Q9H270 AC107918.2-201ENST00000530817 355 ntBASIC16.5■□□□□ 0.23
VPS11Q9H270 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS11Q9H270 AC091304.2-201ENST00000564639 760 ntBASIC16.5■□□□□ 0.23
VPS11Q9H270 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS11Q9H270 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS11Q9H270 AC025062.2-201ENST00000605477 670 ntBASIC16.5■□□□□ 0.23
VPS11Q9H270 AP001350.2-201ENST00000625104 1094 ntBASIC16.5■□□□□ 0.23
VPS11Q9H270 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
VPS11Q9H270 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VPS11Q9H270 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VPS11Q9H270 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VPS11Q9H270 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS11Q9H270 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VPS11Q9H270 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VPS11Q9H270 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VPS11Q9H270 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VPS11Q9H270 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VPS11Q9H270 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS11Q9H270 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
VPS11Q9H270 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VPS11Q9H270 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS11Q9H270 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VPS11Q9H270 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VPS11Q9H270 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS11Q9H270 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.49■□□□□ 0.23
VPS11Q9H270 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS11Q9H270 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
VPS11Q9H270 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.49■□□□□ 0.23
VPS11Q9H270 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS11Q9H270 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS11Q9H270 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.49■□□□□ 0.23
VPS11Q9H270 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.49■□□□□ 0.23
VPS11Q9H270 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS11Q9H270 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
VPS11Q9H270 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.49■□□□□ 0.23
VPS11Q9H270 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 AC087641.1-201ENST00000557561 1021 ntBASIC16.49■□□□□ 0.23
VPS11Q9H270 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS11Q9H270 AC021087.4-201ENST00000563761 564 ntBASIC16.49■□□□□ 0.23
VPS11Q9H270 AC006557.2-201ENST00000592985 1240 ntBASIC16.49■□□□□ 0.23
VPS11Q9H270 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 AC016027.1-202ENST00000607927 1699 ntBASIC16.49■□□□□ 0.23
VPS11Q9H270 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
VPS11Q9H270 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VPS11Q9H270 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.49■□□□□ 0.23
VPS11Q9H270 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS11Q9H270 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS11Q9H270 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS11Q9H270 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS11Q9H270 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VPS11Q9H270 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS11Q9H270 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS11Q9H270 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.48■□□□□ 0.23
VPS11Q9H270 PRAL-201ENST00000624952 3286 ntBASIC16.48■□□□□ 0.23
VPS11Q9H270 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VPS11Q9H270 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VPS11Q9H270 AC126755.1-201ENST00000525846 6405 ntBASIC16.48■□□□□ 0.23
VPS11Q9H270 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS11Q9H270 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS11Q9H270 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS11Q9H270 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS11Q9H270 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS11Q9H270 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.48■□□□□ 0.23
VPS11Q9H270 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VPS11Q9H270 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS11Q9H270 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS11Q9H270 TSPY19P-201ENST00000418461 509 ntBASIC16.48■□□□□ 0.23
VPS11Q9H270 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS11Q9H270 TSPY18P-201ENST00000441642 509 ntBASIC16.48■□□□□ 0.23
VPS11Q9H270 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.48■□□□□ 0.23
VPS11Q9H270 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS11Q9H270 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.48■□□□□ 0.23
VPS11Q9H270 AC010654.1-201ENST00000615722 808 ntBASIC16.48■□□□□ 0.23
VPS11Q9H270 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS11Q9H270 REXO1L6P-202ENST00000619970 1078 ntBASIC16.48■□□□□ 0.23
VPS11Q9H270 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms