Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC46A1Q96NT5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 AC078925.2-201ENST00000624013 1973 ntBASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 AC079776.1-201ENST00000401540 1152 ntBASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 KRT17P8-201ENST00000540749 863 ntBASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SLC46A1Q96NT5 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 MIR1909-201ENST00000411312 80 ntBASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 AL512361.1-201ENST00000554200 418 ntBASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 KRT8P39-201ENST00000396270 1433 ntBASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 AL603756.1-201ENST00000606511 2163 ntBASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SLC46A1Q96NT5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC46A1Q96NT5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms