Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 AC243562.1-201ENST00000560672 389 ntBASIC18.99■□□□□ 0.63
PGBD1Q96JS3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 AC026120.1-201ENST00000611536 926 ntBASIC18.99■□□□□ 0.63
PGBD1Q96JS3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PGBD1Q96JS3 PCGF3-213ENST00000620529 1899 ntBASIC18.99■□□□□ 0.63
PGBD1Q96JS3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.98■□□□□ 0.63
PGBD1Q96JS3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 CNN2P11-201ENST00000429351 262 ntBASIC18.98■□□□□ 0.63
PGBD1Q96JS3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 SPDYE11-202ENST00000450699 704 ntBASIC18.98■□□□□ 0.63
PGBD1Q96JS3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 AC079140.1-201ENST00000508039 487 ntBASIC18.98■□□□□ 0.63
PGBD1Q96JS3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 SNHG9-202ENST00000564014 471 ntBASIC18.98■□□□□ 0.63
PGBD1Q96JS3 SPDYE9P-201ENST00000570642 692 ntBASIC18.98■□□□□ 0.63
PGBD1Q96JS3 MIR3909-201ENST00000579518 119 ntBASIC18.98■□□□□ 0.63
PGBD1Q96JS3 AC027612.4-201ENST00000605371 583 ntBASIC18.98■□□□□ 0.63
PGBD1Q96JS3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 SPDYE10P-202ENST00000612005 668 ntBASIC18.98■□□□□ 0.63
PGBD1Q96JS3 SPDYE8P-202ENST00000612377 668 ntBASIC18.98■□□□□ 0.63
PGBD1Q96JS3 AL513210.1-201ENST00000629608 234 ntBASIC18.98■□□□□ 0.63
PGBD1Q96JS3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PGBD1Q96JS3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 HYMAI-201ENST00000635591 3347 ntBASIC18.97■□□□□ 0.63
PGBD1Q96JS3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 AL138918.1-201ENST00000568306 659 ntBASIC18.97■□□□□ 0.63
PGBD1Q96JS3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 AL161645.1-201ENST00000622716 1255 ntBASIC18.97■□□□□ 0.63
PGBD1Q96JS3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.97■□□□□ 0.63
PGBD1Q96JS3 WASH6P-202ENST00000359512 1437 ntBASIC18.97■□□□□ 0.63
PGBD1Q96JS3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PGBD1Q96JS3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PGBD1Q96JS3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms