Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 SNX33P1-201ENST00000592116 1762 ntBASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 API5-202ENST00000420461 2009 ntTSL 2 BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 AC067750.1-201ENST00000608826 6545 ntBASIC10.67□□□□□ -0.7
SMIM11BQ8TCY0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 AC007686.3-201ENST00000619017 3487 ntBASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 AC132938.5-201ENST00000624980 1813 ntBASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 FAM8A6P-201ENST00000407496 1135 ntBASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 AC012618.2-201ENST00000428058 849 ntBASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMIM11BQ8TCY0 AC126335.2-201ENST00000623362 4637 ntBASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 AC007191.1-201ENST00000623179 2995 ntBASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMIM11BQ8TCY0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms