Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH20Q8N6Y1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH20Q8N6Y1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PCDH20Q8N6Y1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 HLA-A-202ENST00000376806 1854 ntBASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 AL512356.2-201ENST00000546955 174 ntBASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDH20Q8N6Y1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 AC006449.5-201ENST00000610658 2098 ntBASIC16.71■□□□□ 0.27
PCDH20Q8N6Y1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.71■□□□□ 0.26
PCDH20Q8N6Y1 AC011270.2-201ENST00000624293 2550 ntBASIC16.71■□□□□ 0.26
PCDH20Q8N6Y1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
PCDH20Q8N6Y1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDH20Q8N6Y1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDH20Q8N6Y1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms