Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 RN7SL589P-201ENST00000481268 310 ntBASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 AC069335.1-201ENST00000489972 472 ntBASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 AC087641.1-201ENST00000557561 1021 ntBASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 AC005412.3-201ENST00000580309 715 ntBASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC33Q8N5R6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 AC012569.1-201ENST00000591191 1524 ntBASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 COX20P2-201ENST00000452636 358 ntBASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 AC067863.1-201ENST00000494933 530 ntBASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 AC069262.1-201ENST00000539058 672 ntBASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 MIR4745-201ENST00000577608 62 ntBASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCDC33Q8N5R6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 KRT8P39-201ENST00000396270 1433 ntBASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 RBPMS2P1-201ENST00000437762 623 ntBASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 AL161645.1-201ENST00000622716 1255 ntBASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 GGT4P-201ENST00000623672 1708 ntBASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC33Q8N5R6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms