Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.77■□□□□ 0.28
ATPAF2Q8N5M1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF2Q8N5M1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATPAF2Q8N5M1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATPAF2Q8N5M1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 UPF3AP3-201ENST00000420996 769 ntBASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 AC079140.1-201ENST00000508039 487 ntBASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 YBX1P5-201ENST00000509441 847 ntBASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 IGHV3-62-201ENST00000520057 340 ntBASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 AC243562.1-201ENST00000560672 389 ntBASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ATPAF2Q8N5M1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 RPSAP43-201ENST00000402237 625 ntBASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 AC073389.1-201ENST00000595595 795 ntBASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.75■□□□□ 0.27
ATPAF2Q8N5M1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
ATPAF2Q8N5M1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms