Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC170Q8IYT3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC170Q8IYT3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CCDC170Q8IYT3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC170Q8IYT3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CCDC170Q8IYT3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC170Q8IYT3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC170Q8IYT3 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.58■□□□□ 0.41
CCDC170Q8IYT3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 TSPY19P-201ENST00000418461 509 ntBASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 TSPY18P-201ENST00000441642 509 ntBASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 IGHV3-65-201ENST00000523210 341 ntBASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 MIR3909-201ENST00000579518 119 ntBASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC170Q8IYT3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 AC023157.3-201ENST00000619086 2088 ntBASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 MIR3652-201ENST00000579335 131 ntBASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 MIR4515-201ENST00000584082 81 ntBASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 AC093458.2-201ENST00000623150 629 ntBASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC170Q8IYT3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 TMBIM7P-203ENST00000641617 1718 ntBASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC170Q8IYT3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms