Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 CYP2T1P-202ENST00000641596 2535 ntBASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 PRSS29P-201ENST00000440800 595 ntBASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 MIR4492-201ENST00000581627 80 ntBASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 FAM215A-202ENST00000632077 792 ntBASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.97□□□□□ -0.01
HDDC2Q7Z4H3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 AC107918.2-201ENST00000530817 355 ntBASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 AP002469.2-201ENST00000531724 424 ntBASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 AL160237.2-201ENST00000556165 472 ntBASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 AL031008.1-201ENST00000619963 541 ntBASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
HDDC2Q7Z4H3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HDDC2Q7Z4H3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HDDC2Q7Z4H3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.96□□□□□ -0.02
HDDC2Q7Z4H3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.96□□□□□ -0.02
HDDC2Q7Z4H3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HDDC2Q7Z4H3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HDDC2Q7Z4H3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.96□□□□□ -0.02
HDDC2Q7Z4H3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.96□□□□□ -0.02
HDDC2Q7Z4H3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
HDDC2Q7Z4H3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDDC2Q7Z4H3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.95□□□□□ -0.02
HDDC2Q7Z4H3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDDC2Q7Z4H3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HDDC2Q7Z4H3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.95□□□□□ -0.02
HDDC2Q7Z4H3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDDC2Q7Z4H3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HDDC2Q7Z4H3 KRT8P39-201ENST00000396270 1433 ntBASIC14.95□□□□□ -0.02
HDDC2Q7Z4H3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.95□□□□□ -0.02
HDDC2Q7Z4H3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HDDC2Q7Z4H3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms