Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 AC092919.2-201ENST00000623631 1645 ntBASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 SNX18-202ENST00000343017 3140 ntBASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ANKRD55Q3KP44 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 AC138035.3-201ENST00000622706 2791 ntBASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ANKRD55Q3KP44 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 TMBIM7P-203ENST00000641617 1718 ntBASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 CHCHD2P8-201ENST00000429873 447 ntBASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 TSSC2-201ENST00000450217 709 ntBASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 AP005901.3-202ENST00000581653 237 ntBASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 AC093458.2-201ENST00000623150 629 ntBASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ANKRD55Q3KP44 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms