Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CKS1BP61024 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CKS1BP61024 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
CKS1BP61024 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS1BP61024 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS1BP61024 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.56□□□□□ -0.56
CKS1BP61024 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CKS1BP61024 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS1BP61024 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.55□□□□□ -0.56
CKS1BP61024 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS1BP61024 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.55□□□□□ -0.56
CKS1BP61024 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS1BP61024 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS1BP61024 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS1BP61024 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC11.55□□□□□ -0.56
CKS1BP61024 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CKS1BP61024 AC068472.1-201ENST00000474589 881 ntBASIC11.55□□□□□ -0.56
CKS1BP61024 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.55□□□□□ -0.56
CKS1BP61024 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
CKS1BP61024 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.55□□□□□ -0.56
CKS1BP61024 AC079602.3-201ENST00000623931 403 ntBASIC11.55□□□□□ -0.56
CKS1BP61024 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 AC092068.3-201ENST00000587894 2016 ntBASIC11.55□□□□□ -0.56
CKS1BP61024 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS1BP61024 AC097374.2-201ENST00000618617 1306 ntBASIC11.55□□□□□ -0.56
CKS1BP61024 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS1BP61024 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CKS1BP61024 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC11.54□□□□□ -0.56
CKS1BP61024 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CKS1BP61024 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CKS1BP61024 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms