Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC004835.2-201ENST00000603762 682 ntBASIC16.89■□□□□ 0.29
NEK3P51956 AL161645.1-201ENST00000622716 1255 ntBASIC16.89■□□□□ 0.29
NEK3P51956 AC105339.1-204ENST00000636249 355 ntBASIC16.89■□□□□ 0.29
NEK3P51956 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.89■□□□□ 0.29
NEK3P51956 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NEK3P51956 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.89■□□□□ 0.29
NEK3P51956 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.89■□□□□ 0.29
NEK3P51956 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.89■□□□□ 0.29
NEK3P51956 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.89■□□□□ 0.29
NEK3P51956 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEK3P51956 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NEK3P51956 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.88■□□□□ 0.29
NEK3P51956 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.88■□□□□ 0.29
NEK3P51956 AL671277.1-201ENST00000429656 993 ntBASIC16.88■□□□□ 0.29
NEK3P51956 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.88■□□□□ 0.29
NEK3P51956 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NEK3P51956 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.88■□□□□ 0.29
NEK3P51956 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
NEK3P51956 AC109635.5-201ENST00000533593 962 ntBASIC16.88■□□□□ 0.29
NEK3P51956 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NEK3P51956 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.88■□□□□ 0.29
NEK3P51956 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.88■□□□□ 0.29
NEK3P51956 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.88■□□□□ 0.29
NEK3P51956 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 AC026120.1-201ENST00000611536 926 ntBASIC16.88■□□□□ 0.29
NEK3P51956 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.88■□□□□ 0.29
NEK3P51956 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
NEK3P51956 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NEK3P51956 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NEK3P51956 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 KRT18P28-201ENST00000453838 1332 ntBASIC16.88■□□□□ 0.29
NEK3P51956 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NEK3P51956 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.88■□□□□ 0.29
NEK3P51956 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.88■□□□□ 0.29
NEK3P51956 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEK3P51956 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NEK3P51956 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.88■□□□□ 0.29
NEK3P51956 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NEK3P51956 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.87■□□□□ 0.29
NEK3P51956 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.87■□□□□ 0.29
NEK3P51956 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.87■□□□□ 0.29
NEK3P51956 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NEK3P51956 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.87■□□□□ 0.29
NEK3P51956 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NEK3P51956 RNU1-129P-201ENST00000384064 167 ntBASIC16.87■□□□□ 0.29
NEK3P51956 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 METTL21AP1-201ENST00000438852 635 ntBASIC16.87■□□□□ 0.29
NEK3P51956 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 TIMM8BP1-201ENST00000452384 211 ntBASIC16.87■□□□□ 0.29
NEK3P51956 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.87■□□□□ 0.29
NEK3P51956 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.87■□□□□ 0.29
NEK3P51956 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
NEK3P51956 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NEK3P51956 RARRES2P8-201ENST00000566335 367 ntBASIC16.87■□□□□ 0.29
NEK3P51956 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.87■□□□□ 0.29
NEK3P51956 U1.21-201ENST00000580816 167 ntBASIC16.87■□□□□ 0.29
NEK3P51956 AC022145.2-201ENST00000598203 171 ntBASIC16.87■□□□□ 0.29
NEK3P51956 AL031055.1-201ENST00000606362 631 ntBASIC16.87■□□□□ 0.29
NEK3P51956 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NEK3P51956 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEK3P51956 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms