Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
PCP4P48539 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 PCDHGB4-202ENST00000615384 4725 ntAPPRIS P1 BASIC11□□□□□ -0.65
PCP4P48539 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
PCP4P48539 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PCP4P48539 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 ALOX12P2-203ENST00000570921 1945 ntBASIC10.99□□□□□ -0.65
PCP4P48539 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
PCP4P48539 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC10.99□□□□□ -0.65
PCP4P48539 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
PCP4P48539 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
PCP4P48539 IP6K2-210ENST00000431721 2174 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 RBFOX1-224ENST00000641259 3651 ntBASIC10.99□□□□□ -0.65
PCP4P48539 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC10.99□□□□□ -0.65
PCP4P48539 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 ZMYM5-201ENST00000337963 3268 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
PCP4P48539 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
PCP4P48539 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC10.99□□□□□ -0.65
PCP4P48539 ALDH7A1-228ENST00000636886 2321 ntTSL 5 BASIC10.99□□□□□ -0.65
PCP4P48539 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC10.99□□□□□ -0.65
PCP4P48539 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC10.99□□□□□ -0.65
PCP4P48539 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
PCP4P48539 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 GOLGA2P9-201ENST00000596977 1937 ntBASIC10.99□□□□□ -0.65
PCP4P48539 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC10.99□□□□□ -0.65
PCP4P48539 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
PCP4P48539 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
PCP4P48539 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC10.99□□□□□ -0.65
PCP4P48539 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC10.99□□□□□ -0.65
PCP4P48539 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
PCP4P48539 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 AC061975.6-201ENST00000579045 1553 ntBASIC10.99□□□□□ -0.65
PCP4P48539 AF131216.4-201ENST00000638924 1588 ntBASIC10.99□□□□□ -0.65
PCP4P48539 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
PCP4P48539 CSPG4P13-202ENST00000567704 4801 ntBASIC10.98□□□□□ -0.65
PCP4P48539 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
PCP4P48539 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC10.98□□□□□ -0.65
PCP4P48539 KLK2-201ENST00000325321 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PCP4P48539 MED24-212ENST00000501516 3037 ntTSL 5 BASIC10.98□□□□□ -0.65
PCP4P48539 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PCP4P48539 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.98□□□□□ -0.65
PCP4P48539 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PCP4P48539 GBP1P1-201ENST00000394662 1740 ntBASIC10.98□□□□□ -0.65
PCP4P48539 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC10.98□□□□□ -0.65
PCP4P48539 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PCP4P48539 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
PCP4P48539 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PCP4P48539 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
PCP4P48539 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
PCP4P48539 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC10.98□□□□□ -0.65
PCP4P48539 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
PCP4P48539 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PCP4P48539 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC10.98□□□□□ -0.65
PCP4P48539 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
PCP4P48539 TPT1-202ENST00000379055 948 ntTSL 2 BASIC10.98□□□□□ -0.65
PCP4P48539 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
PCP4P48539 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
PCP4P48539 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms