RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 NISCHQ9Y2I1 1504 aa25.15■■□□□ 1.62
RBFOX1-224ENST00000641259 CCDC180Q9P1Z9 1646 aa21.75■■□□□ 1.07
RBFOX1-224ENST00000641259 ZCCHC6Q5VYS8 1495 aaKnown RBP21.17■□□□□ 0.98
RBFOX1-224ENST00000641259 SHROOM4Q9ULL8 1493 aa20.84■□□□□ 0.93
RBFOX1-224ENST00000641259 DCAF8L2P0C7V8 631 aa20.8■□□□□ 0.92
RBFOX1-224ENST00000641259 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
RBFOX1-224ENST00000641259 ABCC9O60706 1549 aa20.59■□□□□ 0.89
RBFOX1-224ENST00000641259 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
RBFOX1-224ENST00000641259 SCRIBQ14160 1630 aa20.22■□□□□ 0.83
RBFOX1-224ENST00000641259 NACADO15069 1562 aa20.2■□□□□ 0.82
RBFOX1-224ENST00000641259 SUPT5HO00267 1087 aaKnown RBP20.06■□□□□ 0.8
RBFOX1-224ENST00000641259 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
RBFOX1-224ENST00000641259 UNC13AQ9UPW8 1703 aa19.81■□□□□ 0.76
RBFOX1-224ENST00000641259 PPARGC1BQ86YN6 1023 aaKnown RBP19.68■□□□□ 0.74
RBFOX1-224ENST00000641259 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
RBFOX1-224ENST00000641259 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
RBFOX1-224ENST00000641259 PCGF6Q9BYE7 350 aa19.59■□□□□ 0.73
RBFOX1-224ENST00000641259 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
RBFOX1-224ENST00000641259 MROH2BQ7Z745 1585 aa19.53■□□□□ 0.72
RBFOX1-224ENST00000641259 PELP1Q8IZL8 1130 aaKnown RBP19.51■□□□□ 0.71
RBFOX1-224ENST00000641259 HRCP23327 699 aa19.5■□□□□ 0.71
RBFOX1-224ENST00000641259 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.71
RBFOX1-224ENST00000641259 WIZO95785 1651 aa19.41■□□□□ 0.7
RBFOX1-224ENST00000641259 BAZ1AQ9NRL2 1556 aaPredicted RBP19.35■□□□□ 0.69
RBFOX1-224ENST00000641259 SMARCA4P51532 1647 aa19.31■□□□□ 0.68
RBFOX1-224ENST00000641259 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
RBFOX1-224ENST00000641259 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
RBFOX1-224ENST00000641259 PEG3Q9GZU2 1588 aa19.01■□□□□ 0.63
RBFOX1-224ENST00000641259 SMARCA2P51531 1590 aa18.97■□□□□ 0.63
RBFOX1-224ENST00000641259 CCDC88BA6NC98 1476 aa18.95■□□□□ 0.62
RBFOX1-224ENST00000641259 ATAD2BQ9ULI0 1458 aa18.94■□□□□ 0.62
RBFOX1-224ENST00000641259 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
RBFOX1-224ENST00000641259 SCAF1Q9H7N4 1312 aaKnown RBP18.86■□□□□ 0.61
RBFOX1-224ENST00000641259 MYT1Q01538 1121 aa18.82■□□□□ 0.6
RBFOX1-224ENST00000641259 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
RBFOX1-224ENST00000641259 TRIM41Q8WV44 630 aa18.74■□□□□ 0.59
RBFOX1-224ENST00000641259 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
RBFOX1-224ENST00000641259 NCAPD3P42695 1498 aa18.68■□□□□ 0.58
RBFOX1-224ENST00000641259 HMGXB3Q12766 1538 aa18.66■□□□□ 0.58
RBFOX1-224ENST00000641259 LOC105371045A0A1W2PR82 267 aa18.64■□□□□ 0.58
RBFOX1-224ENST00000641259 EHMT2Q96KQ7 1210 aa18.63■□□□□ 0.57
RBFOX1-224ENST00000641259 CC2D2AQ9P2K1 1620 aa18.61■□□□□ 0.57
RBFOX1-224ENST00000641259 FAM9AQ8IZU1 332 aaPredicted RBP18.55■□□□□ 0.56
RBFOX1-224ENST00000641259 GTF3C3Q9Y5Q9 886 aa18.5■□□□□ 0.55
RBFOX1-224ENST00000641259 YTHDC1Q96MU7 727 aaKnown RBP18.46■□□□□ 0.55
RBFOX1-224ENST00000641259 SYNJ1O43426 1573 aa18.44■□□□□ 0.54
RBFOX1-224ENST00000641259 WRNQ14191 1432 aaPredicted RBP eCLIP18.41■□□□□ 0.54
RBFOX1-224ENST00000641259 SOGA1O94964 1423 aa18.37■□□□□ 0.53
RBFOX1-224ENST00000641259 CFTRP13569 1480 aa18.35■□□□□ 0.53
RBFOX1-224ENST00000641259 CENPBP07199 599 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-224ENST00000641259 RUSC2Q8N2Y8 1516 aa18.34■□□□□ 0.53
RBFOX1-224ENST00000641259 NEUROD1Q13562 356 aa18.33■□□□□ 0.52
RBFOX1-224ENST00000641259 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
RBFOX1-224ENST00000641259 ACIN1Q9UKV3 1341 aaKnown RBP18.26■□□□□ 0.51
RBFOX1-224ENST00000641259 PRDM2Q13029 1718 aa18.26■□□□□ 0.51
RBFOX1-224ENST00000641259 TOP2BQ02880 1626 aa18.25■□□□□ 0.51
RBFOX1-224ENST00000641259 TRIM26Q12899 539 aaPredicted RBP18.25■□□□□ 0.51
RBFOX1-224ENST00000641259 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
RBFOX1-224ENST00000641259 BIVM-ERCC5R4GMW8 1640 aa18.23■□□□□ 0.51
RBFOX1-224ENST00000641259 CUX1P39880 1505 aa18.23■□□□□ 0.51
RBFOX1-224ENST00000641259 ZEB1P37275 1124 aaPredicted RBP18.19■□□□□ 0.5
RBFOX1-224ENST00000641259 NESP48681 1621 aa18.19■□□□□ 0.5
RBFOX1-224ENST00000641259 TTBK1Q5TCY1 1321 aaPredicted RBP18.16■□□□□ 0.5
RBFOX1-224ENST00000641259 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
RBFOX1-224ENST00000641259 EEA1Q15075 1411 aa18.1■□□□□ 0.49
RBFOX1-224ENST00000641259 FANCD2Q9BXW9 1451 aa18.08■□□□□ 0.48
RBFOX1-224ENST00000641259 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
RBFOX1-224ENST00000641259 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
RBFOX1-224ENST00000641259 KIF21BO75037 1637 aa17.98■□□□□ 0.47
RBFOX1-224ENST00000641259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
RBFOX1-224ENST00000641259 GOLGA3Q08378 1498 aa17.97■□□□□ 0.47
RBFOX1-224ENST00000641259 FGD5Q6ZNL6 1462 aa17.97■□□□□ 0.47
RBFOX1-224ENST00000641259 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.47
RBFOX1-224ENST00000641259 RAPGEF2Q9Y4G8 1499 aa17.96■□□□□ 0.47
RBFOX1-224ENST00000641259 CEP162Q5TB80 1403 aa17.94■□□□□ 0.46
RBFOX1-224ENST00000641259 TNIKQ9UKE5 1360 aa17.94■□□□□ 0.46
RBFOX1-224ENST00000641259 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
RBFOX1-224ENST00000641259 BCL11AQ9H165 835 aa17.93■□□□□ 0.46
RBFOX1-224ENST00000641259 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
RBFOX1-224ENST00000641259 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
RBFOX1-224ENST00000641259 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
RBFOX1-224ENST00000641259 TOPBP1Q92547 1522 aa17.91■□□□□ 0.46
RBFOX1-224ENST00000641259 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
RBFOX1-224ENST00000641259 KIF27Q86VH2 1401 aa17.87■□□□□ 0.45
RBFOX1-224ENST00000641259 CUX2O14529 1486 aa17.87■□□□□ 0.45
RBFOX1-224ENST00000641259 PRXQ9BXM0 1461 aa17.87■□□□□ 0.45
RBFOX1-224ENST00000641259 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
RBFOX1-224ENST00000641259 POLA1P09884 1462 aaPredicted RBP17.86■□□□□ 0.45
RBFOX1-224ENST00000641259 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.44
RBFOX1-224ENST00000641259 ERICH3Q5RHP9 1530 aa17.79■□□□□ 0.44
RBFOX1-224ENST00000641259 IGF1RP08069 1367 aa17.78■□□□□ 0.44
RBFOX1-224ENST00000641259 ABCA10Q8WWZ4 1543 aa17.75■□□□□ 0.43
RBFOX1-224ENST00000641259 WDR97A6NE52 1622 aa17.75■□□□□ 0.43
RBFOX1-224ENST00000641259 RANGAP1P46060 587 aaPredicted RBP17.75■□□□□ 0.43
RBFOX1-224ENST00000641259 CLIP1P30622 1438 aa17.72■□□□□ 0.43
RBFOX1-224ENST00000641259 TARBP1Q13395 1621 aaKnown RBP17.66■□□□□ 0.42
RBFOX1-224ENST00000641259 CARMIL1Q5VZK9 1371 aa17.65■□□□□ 0.42
RBFOX1-224ENST00000641259 ABCA5Q8WWZ7 1642 aa17.65■□□□□ 0.42
RBFOX1-224ENST00000641259 MRC2Q9UBG0 1479 aa17.65■□□□□ 0.42
RBFOX1-224ENST00000641259 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms