Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.53□□□□□ -0.24
SNCAP37840 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.53□□□□□ -0.24
SNCAP37840 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SNCAP37840 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.53□□□□□ -0.24
SNCAP37840 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNCAP37840 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SNCAP37840 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNCAP37840 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
SNCAP37840 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SNCAP37840 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNCAP37840 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
SNCAP37840 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.52□□□□□ -0.24
SNCAP37840 AC104581.4-201ENST00000623126 3052 ntBASIC13.52□□□□□ -0.24
SNCAP37840 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SNCAP37840 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
SNCAP37840 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.52□□□□□ -0.25
SNCAP37840 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.52□□□□□ -0.25
SNCAP37840 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.52□□□□□ -0.25
SNCAP37840 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.52□□□□□ -0.25
SNCAP37840 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.52□□□□□ -0.25
SNCAP37840 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.52□□□□□ -0.25
SNCAP37840 AC114341.1-201ENST00000618070 349 ntBASIC13.52□□□□□ -0.25
SNCAP37840 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.52□□□□□ -0.25
SNCAP37840 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.52□□□□□ -0.25
SNCAP37840 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SNCAP37840 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.52□□□□□ -0.25
SNCAP37840 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
SNCAP37840 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.52□□□□□ -0.25
SNCAP37840 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.52□□□□□ -0.25
SNCAP37840 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SNCAP37840 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
SNCAP37840 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.52□□□□□ -0.25
SNCAP37840 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.52□□□□□ -0.25
SNCAP37840 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SNCAP37840 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNCAP37840 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SNCAP37840 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.51□□□□□ -0.25
SNCAP37840 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.51□□□□□ -0.25
SNCAP37840 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SNCAP37840 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.51□□□□□ -0.25
SNCAP37840 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.51□□□□□ -0.25
SNCAP37840 SPDYE21P-201ENST00000413323 827 ntBASIC13.51□□□□□ -0.25
SNCAP37840 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNCAP37840 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.51□□□□□ -0.25
SNCAP37840 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.51□□□□□ -0.25
SNCAP37840 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms