Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFC4P35249 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFC4P35249 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.33■□□□□ 0.85
RFC4P35249 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFC4P35249 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFC4P35249 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.33■□□□□ 0.84
RFC4P35249 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RFC4P35249 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFC4P35249 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.33■□□□□ 0.84
RFC4P35249 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.33■□□□□ 0.84
RFC4P35249 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFC4P35249 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RFC4P35249 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.32■□□□□ 0.84
RFC4P35249 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC4P35249 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFC4P35249 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.32■□□□□ 0.84
RFC4P35249 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC4P35249 RPL13P2-201ENST00000440687 659 ntBASIC20.32■□□□□ 0.84
RFC4P35249 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.32■□□□□ 0.84
RFC4P35249 PTP4A1P2-201ENST00000546033 454 ntBASIC20.32■□□□□ 0.84
RFC4P35249 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.32■□□□□ 0.84
RFC4P35249 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC4P35249 BRI3BPP1-201ENST00000594224 787 ntBASIC20.32■□□□□ 0.84
RFC4P35249 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.32■□□□□ 0.84
RFC4P35249 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.32■□□□□ 0.84
RFC4P35249 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFC4P35249 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC4P35249 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.32■□□□□ 0.84
RFC4P35249 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RFC4P35249 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFC4P35249 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC4P35249 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC4P35249 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.32■□□□□ 0.84
RFC4P35249 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC4P35249 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.32■□□□□ 0.84
RFC4P35249 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC4P35249 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFC4P35249 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.31■□□□□ 0.84
RFC4P35249 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 AC006538.1-201ENST00000567905 1585 ntBASIC20.31■□□□□ 0.84
RFC4P35249 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RFC4P35249 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.31■□□□□ 0.84
RFC4P35249 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.31■□□□□ 0.84
RFC4P35249 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC20.31■□□□□ 0.84
RFC4P35249 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.31■□□□□ 0.84
RFC4P35249 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.31■□□□□ 0.84
RFC4P35249 ENPP7P5-201ENST00000541031 1031 ntBASIC20.31■□□□□ 0.84
RFC4P35249 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.31■□□□□ 0.84
RFC4P35249 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.31■□□□□ 0.84
RFC4P35249 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.31■□□□□ 0.84
RFC4P35249 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.31■□□□□ 0.84
RFC4P35249 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.31■□□□□ 0.84
RFC4P35249 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.31■□□□□ 0.84
RFC4P35249 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFC4P35249 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC4P35249 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
RFC4P35249 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.3■□□□□ 0.84
RFC4P35249 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC4P35249 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RFC4P35249 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.3■□□□□ 0.84
RFC4P35249 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC4P35249 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.3■□□□□ 0.84
RFC4P35249 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC4P35249 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.3■□□□□ 0.84
RFC4P35249 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RFC4P35249 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.3■□□□□ 0.84
RFC4P35249 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFC4P35249 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.3■□□□□ 0.84
RFC4P35249 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.3■□□□□ 0.84
RFC4P35249 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.3■□□□□ 0.84
RFC4P35249 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC4P35249 AC099548.2-209ENST00000480264 625 ntBASIC20.3■□□□□ 0.84
RFC4P35249 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RFC4P35249 AP001889.1-201ENST00000525414 633 ntBASIC20.3■□□□□ 0.84
RFC4P35249 AC068587.3-201ENST00000526613 355 ntBASIC20.3■□□□□ 0.84
RFC4P35249 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC20.3■□□□□ 0.84
RFC4P35249 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC20.3■□□□□ 0.84
RFC4P35249 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.3■□□□□ 0.84
RFC4P35249 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RFC4P35249 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFC4P35249 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RFC4P35249 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms