Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC19.56■□□□□ 0.72
NCLP19338 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.56■□□□□ 0.72
NCLP19338 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.56■□□□□ 0.72
NCLP19338 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.56■□□□□ 0.72
NCLP19338 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
NCLP19338 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.56■□□□□ 0.72
NCLP19338 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
NCLP19338 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.56■□□□□ 0.72
NCLP19338 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.56■□□□□ 0.72
NCLP19338 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.56■□□□□ 0.72
NCLP19338 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.56■□□□□ 0.72
NCLP19338 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.56■□□□□ 0.72
NCLP19338 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.56■□□□□ 0.72
NCLP19338 SLC25A6P4-201ENST00000586535 553 ntBASIC19.56■□□□□ 0.72
NCLP19338 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.56■□□□□ 0.72
NCLP19338 AC004817.3-201ENST00000602957 2129 ntBASIC19.56■□□□□ 0.72
NCLP19338 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.56■□□□□ 0.72
NCLP19338 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NCLP19338 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
NCLP19338 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 AC104640.1-201ENST00000562617 2109 ntBASIC19.55■□□□□ 0.72
NCLP19338 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.55■□□□□ 0.72
NCLP19338 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.55■□□□□ 0.72
NCLP19338 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.55■□□□□ 0.72
NCLP19338 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NCLP19338 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NCLP19338 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NCLP19338 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NCLP19338 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
NCLP19338 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NCLP19338 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.55■□□□□ 0.72
NCLP19338 DUX4L17-201ENST00000557360 1267 ntBASIC19.55■□□□□ 0.72
NCLP19338 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.55■□□□□ 0.72
NCLP19338 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.55■□□□□ 0.72
NCLP19338 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NCLP19338 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.55■□□□□ 0.72
NCLP19338 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.55■□□□□ 0.72
NCLP19338 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 AL596087.1-201ENST00000400979 1969 ntBASIC19.55■□□□□ 0.72
NCLP19338 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NCLP19338 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 AC097376.2-205ENST00000610159 5334 ntBASIC19.55■□□□□ 0.72
NCLP19338 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NCLP19338 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.55■□□□□ 0.72
NCLP19338 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC19.54■□□□□ 0.72
NCLP19338 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NCLP19338 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.54■□□□□ 0.72
NCLP19338 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 PRAL-201ENST00000624952 3286 ntBASIC19.54■□□□□ 0.72
NCLP19338 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NCLP19338 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NCLP19338 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.54■□□□□ 0.72
NCLP19338 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.54■□□□□ 0.72
NCLP19338 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NCLP19338 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms