Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT4P19013 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT4P19013 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KRT4P19013 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
KRT4P19013 AP001350.2-201ENST00000625104 1094 ntBASIC16.46■□□□□ 0.23
KRT4P19013 PGM5P2-202ENST00000637225 1043 ntBASIC16.46■□□□□ 0.23
KRT4P19013 IER3-202ENST00000376377 1350 ntBASIC16.46■□□□□ 0.23
KRT4P19013 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT4P19013 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT4P19013 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 AC136621.1-201ENST00000624017 2304 ntBASIC16.46■□□□□ 0.23
KRT4P19013 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT4P19013 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
KRT4P19013 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
KRT4P19013 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
KRT4P19013 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
KRT4P19013 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
KRT4P19013 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
KRT4P19013 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT4P19013 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
KRT4P19013 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT4P19013 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT4P19013 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT4P19013 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT4P19013 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
KRT4P19013 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT4P19013 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.45■□□□□ 0.22
KRT4P19013 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
KRT4P19013 KRT16P4-201ENST00000453883 522 ntBASIC16.45■□□□□ 0.22
KRT4P19013 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT4P19013 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT4P19013 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
KRT4P19013 AC139887.3-201ENST00000568585 713 ntBASIC16.45■□□□□ 0.22
KRT4P19013 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT4P19013 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT4P19013 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT4P19013 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT4P19013 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT4P19013 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT4P19013 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT4P19013 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT4P19013 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
KRT4P19013 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT4P19013 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT4P19013 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT4P19013 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.45■□□□□ 0.22
KRT4P19013 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT4P19013 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.45■□□□□ 0.22
KRT4P19013 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT4P19013 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KRT4P19013 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
KRT4P19013 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT4P19013 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT4P19013 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT4P19013 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT4P19013 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.44■□□□□ 0.22
KRT4P19013 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT4P19013 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
KRT4P19013 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.44■□□□□ 0.22
KRT4P19013 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT4P19013 AC107918.2-201ENST00000530817 355 ntBASIC16.44■□□□□ 0.22
KRT4P19013 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT4P19013 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
KRT4P19013 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT4P19013 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT4P19013 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.44■□□□□ 0.22
KRT4P19013 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms