Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.28□□□□□ -0.12
CCL2P13500 AC105339.1-204ENST00000636249 355 ntBASIC14.28□□□□□ -0.12
CCL2P13500 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCL2P13500 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.27□□□□□ -0.12
CCL2P13500 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CCL2P13500 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.27□□□□□ -0.12
CCL2P13500 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.27□□□□□ -0.12
CCL2P13500 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.27□□□□□ -0.12
CCL2P13500 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CCL2P13500 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CCL2P13500 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCL2P13500 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCL2P13500 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.27□□□□□ -0.12
CCL2P13500 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL2P13500 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL2P13500 SPCS2P4-201ENST00000436160 681 ntBASIC14.27□□□□□ -0.13
CCL2P13500 RN7SL589P-201ENST00000481268 310 ntBASIC14.27□□□□□ -0.13
CCL2P13500 PRYP6-201ENST00000514804 343 ntBASIC14.27□□□□□ -0.13
CCL2P13500 IGHV3-62-201ENST00000520057 340 ntBASIC14.27□□□□□ -0.13
CCL2P13500 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.27□□□□□ -0.13
CCL2P13500 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL2P13500 AC027307.2-201ENST00000591252 911 ntBASIC14.27□□□□□ -0.13
CCL2P13500 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.27□□□□□ -0.13
CCL2P13500 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL2P13500 AL691403.2-201ENST00000618460 490 ntBASIC14.27□□□□□ -0.13
CCL2P13500 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL2P13500 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CCL2P13500 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL2P13500 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.27□□□□□ -0.13
CCL2P13500 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL2P13500 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CCL2P13500 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.27□□□□□ -0.13
CCL2P13500 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCL2P13500 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL2P13500 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.26□□□□□ -0.13
CCL2P13500 UXT-AS1-201ENST00000590504 1525 ntBASIC14.26□□□□□ -0.13
CCL2P13500 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCL2P13500 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL2P13500 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CCL2P13500 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCL2P13500 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 AC004461.1-201ENST00000412461 403 ntBASIC14.26□□□□□ -0.13
CCL2P13500 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL2P13500 AL592309.1-201ENST00000443127 649 ntBASIC14.26□□□□□ -0.13
CCL2P13500 AC004967.1-201ENST00000453589 447 ntBASIC14.26□□□□□ -0.13
CCL2P13500 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCL2P13500 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.26□□□□□ -0.13
CCL2P13500 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL2P13500 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL2P13500 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL2P13500 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL2P13500 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL2P13500 AC022145.2-201ENST00000598203 171 ntBASIC14.26□□□□□ -0.13
CCL2P13500 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.26□□□□□ -0.13
CCL2P13500 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL2P13500 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms